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C.elegans
Donor Splice Sites Acceptor Splice Sites
pos oligomer contribution pos oligomer contribution
5 G 81.74 -5 T 63.94
2 T 42.91 -6 T 44.69
2 C -42.91 -3 G -33.44
0 G 40.48 -5 G -31.59
3 A 35.83 -3 C 28.81
5 C -32.45 -5 A -26.06
5 GT 83.59 -6 TT 75.13
4 AG 69.62 -5 TT 59.89
2 TA 59.49 -3 GA -37.54
-3 GT -52.46 -7 TT 35.76
1 GT 48.17 -3 CA 32.34
1 GC -48.17 -4 AG -24.65
0 GGT 58.18 -3 GAG -35.24
1 GTA 57.94 -7 ATT 31.66
4 AGT 57.88 -3 CAG 30.37
5 GTT 45.66 -7 TTT 29.77
-1 AGG 41.41 -6 TTG 28.41
-3 GTA -37.66 -5 TTC 28.19
0 GGTA 44.15 -4 AGAG -23.62
-1 AGGT 39.86 -6 TTGC 23.27
2 TGAG 35.32 -46 GTAA 22.66
1 GTAA 34.27 -5 TTCA 22.28
3 GAGT 28.95 -46 GGTA 21.87
2 TAAG 27.56 -47 GGTA 20.66
1 GTGAG 33.63 -6 TTGCA 22.08
42 TTCAG 27.44 -45 GTAAG 21.20
2 TGAGT 27.23 -5 TTCAG 20.74
1 GTAAG 26.29 -46 GTAAG 20.22
43 TTCAG 26.07 -44 GTAAG 19.77
41 TTCAG 25.17 -6 TTCCA 19.57
1 GTGAGT 25.67 -6 TTGCAG 20.43
42 TTTCAG 23.28 -6 TTCCAG 18.11
44 TTTCAG 23.23 -6 TTACAG 17.76
41 TTTCAG 20.84 -6 TTTCAG 16.23
40 TTTCAG 19.72 -45 GTAAGT 13.03
43 TTTCAG 19.62 -46 GTGAGT 11.80
0 GGTAAGT -13.55 -6 TTTCAGT 13.04
0 GGTTTGT 13.15 -6 TTTCAGC 12.50
-1 AGGTAAG -12.87 -7 TTTCCAG 10.78
0 AGTGAGT 12.21 -6 TTCCAGA 9.18
0 CGTAAGT 12.11 -7 ATTACAG 8.88
1 GTGAGTT 12.00 -6 TTACAGC 8.85
-1 AGGTAAGT -10.59 -6 TTTCAGGT -10.17
0 GGTAAGTT -9.69 -7 TTTCCAGC 7.06
-1 AGGTGAAT 7.77 -7 TTTTCAGT 6.54
-1 AGGTATGT -7.50 -6 TTTCAGAT -6.40
-2 CAGGTAAG -7.24 -7 TTTACAGC 6.27
0 GGTTGGTT 7.17 -7 TTTTCAGC 5.89



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Next: About this document ... Petra Philips 2007-07-05
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