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A.thaliana
Donor Splice Sites Acceptor Splice Sites
pos oligomer contribution pos oligomer contribution
5 G 151.56 -3 G -116.54
0 G 110.63 -3 C 99.41
3 A 96.96 -5 T 77.45
2 T 93.08 -8 T 75.91
2 C -93.08 -9 T 74.65
-1 A 75.91 -12 T 74.05
5 GT 156.03 -9 AG -132.66
2 TA 137.40 -8 AG -128.56
4 AG 130.96 -3 GA -120.51
-1 AG 119.31 -10 AG -120.33
0 GG 114.40 -11 AG -114.00
1 GT 96.25 -3 CA 102.80
0 GGT 135.92 -3 GAG -101.65
1 GTA 119.54 -3 CAG 86.71
-1 AGG 104.42 -10 CAG -76.63
4 AGT 97.90 -9 CAG -69.93
2 TAA 75.79 -11 CAG -67.34
-2 CAG 62.07 -10 TAG -62.96
0 GGTA 93.28 -3 TAGG 51.43
-1 AGGT 92.86 -4 AGAG -50.37
1 GTAA 62.50 -3 CAGG 49.98
-2 CAGG 51.34 -4 GCAG 43.11
2 TGAG 47.51 -26 CTAA 41.59
2 TAAG 42.76 -4 ACAG 41.49
-2 CAGGT 38.23 -5 TGCAG 26.50
1 GTGAG 37.66 -4 AGAGG -24.45
-1 AGGTT 37.06 -4 ATAGG 23.57
1 GTAAG 33.49 -5 TGTAG 21.80
-2 AAGGT 30.45 -6 TTTCA 20.65
0 GGTAA 29.85 -26 CTAAC 19.93
0 TGTAAG 25.16 -6 TTTCAG 14.68
-2 CAGGTT 24.36 -5 TGTAGG 11.68
1 GTGAGT 21.61 -6 TGGCAG 11.12
0 GGTAAG -20.27 -6 AGGCAG -10.37
-1 AGGTTT 19.27 -5 TATAGG 9.64
0 GGTAAA 17.02 -5 TGCAGT 9.51
-1 AGGTAAG -19.54 -6 TTTCAGG 7.08
0 GGTAAGT -12.72 -7 CAGGCAG -4.62
-2 CAGGTTT 11.43 -7 TTGGCAG 4.53
0 TGTAAGT 10.27 -6 TGGCAGG 4.52
0 TGTGAGT 9.79 -7 TTTTCAG 4.30
-1 AGGTGAG -9.72 -5 TGCAGTG 4.22
-1 AGGTAAGT -5.73 -6 TTTCAGGG 1.57
-2 AAGGTAAG -4.62 -3 TAGGGTTT -1.50
-1 AGGTGAGT -4.56 -7 ATTTCAGG 1.45
-2 CAGGTAAG -3.69 -8 TGTAACAG 1.33
1 GTATCCTT 3.15 -7 TTTTCAGG 1.32
-1 AGGTAAGC -2.96 -8 TTTGGCAG 1.31



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Next: About this document ... Petra Philips 2007-07-05
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